Bioconductor - MBQN
WebMean/Median-balanced quantile normalization. DOI: 10.18129/B9.bioc.MBQN. Bioconductor version: Release (3.18) Modified quantile normalization for omics or other matrix-like data distorted in location and scale. Author: Eva Brombacher [aut, cre] , Clemens Kreutz [aut, ctb] , Ariane Schad [aut, ctb]
GitHub - arianeschad/MBQN: Mean/Median-balanced quantile …
WebMar 11, 2022 · MBQN Package. Mean/Median-balanced quantile normalization for preprocessing omics data. Description. This package contains a modified quantile normalization (QN) for preprocessing and analysis of omics or other matrix-like organized data with intensity values biased by global, columnwise …
Package Recipe 'bioconductor-mbqn' — Bioconda documentation
Webmamba create--name myenvname bioconductor-mbqn with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options). Alternatively, use the docker container:
Webcombined_mbqn Data frame containing RI, p value and statistic calculated for MBQN threshold Significance threshold for p value of Pitman-Morgan variance test plot Boolean values if logistic regression curves that are used to …
MBQN: Mean/Median-balanced quantile normalization
WebNov 8, 2020 · example_NApattern: Missing value pattern dataset getKminmax: Get the k largest/smallest elements getPvalue: Calculates Pitman-Morgan variance test on two matrices getPXDfile: Download data from PRIDE mbqn: Mean/Median-balanced quantile normalization mbqnBoxplot: Combined box plot and line plot mbqnGetIntersect: Helper function for mbqnGetThreshold ...
mbqn : Mean/Median-balanced quantile normalization
WebNov 8, 2020 · a function like mean, median (default), a user defined function, or a numeric vector of weights with length nrow(x) to balance each feature across samples. Functions can be parsed also as characters. If FUN = NULL, features are not balanced, i.e. normal QN is …
Multi-Batch Quasi-Newton Method with Artificial Neural Network …
WebIn this study, a Multi-Batch Quasi-Newton (MBQN) and Limited Memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS) gradient methods are implemented to solve these issues of the recommendation system. To solve the cold start and data sparsity issues, the MBQN method overlaps the consecutive sample.
WebIn a round-bottomed flask is mixed quinoxaline (2 mL, 1.73 10-2. mol) with ethyliodide (2mL, 2.5 10-2mol). After sealing, the solution is heated 48h at 60°C under stirring. After cooling down, Et2O is added and the orange precipitate is then filtered, washed with Et2O and dried, affording 2.525 g (51%) of the tittle. 3.
Bioconductor - MBQN (development version)
WebThis is the development version of MBQN; for the stable release version, see MBQN. Mean/Median-balanced quantile normalization. DOI: 10.18129/B9.bioc.MBQN Bioconductor version: Development (3.19) Modified quantile normalization for omics or other matrix-like data distorted in location and scale.
Monte Carlo simulation results | Download Scientific Diagram
WebIn addition to this, the results reveal that the MBQN method attains the ratio value of RMSE as 0.973 and the existing method attains the ratio value of RMSE as 2.776. View Get access to 30 ...
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